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ASSESSMENT OF MICROBIAL QUALITY AND HEAVY METAL ACCUMULATION IN VEGETABLES IRRIGATED WITH WASTEWATER IN PERI-URBAN FARMS AROUND BENIN CITY

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ASSESSMENT OF MICROBIAL QUALITY AND HEAVY METAL ACCUMULATION INVEGETABLES IRRIGATED WITH WASTEWATER IN PERI-URBAN FARMS AROUND BENIN CITY

CHAPTER ONE

INTRODUCTION

 

1.1 Background to the Study

The rapid urbanization and population increase of Nigerian cities has led to both an increasing and pressing demand of fresh vegetables but has also produced large amounts of both municipal and industrial wastewater whose treatment facilities are completely underdeveloped. The capital of Edo State, Benin City, is a classic example of this tension: its growing peri-urban fringe is home to a large number of smallholder vegetable farms that more and more use wastewater of open drainages, industrial effluents, and household sewage systems as their source of irrigation, especially in the dry season when freshwater is limited.

Irrigation with untreated or partially treated wastewater is a commonplace occurrence in West African cities that is economically rational due to the nutrient levels of the wastewater and the economic inability of the urban poor to have access to treated irrigation water (IntechOpen, 2022). Nevertheless, wastewater is also a source of numerous chemical and biological threats at the same time. Effluents that have not been treated, or treated poorly on peri-urban Benin City vegetable farms are likely to harbor substantial levels of pathogenic bacteria, enteric viruses and helminth eggs, as well as toxic levels of heavy metals in the effluents, which result out of industrial effluents, vehicular pollution, and corrosion of urban aging infrastructures.

The concentration of heavy metal in effluent water at industrial facilities in Benin City was measured in a study, providing iron levels of 7.65812.162 mg/L (wet season) that are much higher than the NESREA limit of 0.5 mg/L, and lead levels of 0.6101.201 mg/L (wet season), which significantly exceeds the perm These observations are supported by the presence of chromium in the industrial effluent in Benin City (Akharame & Ogbebor, 2023), and indicate that much is at stake in heavy metal contamination of wastewater-irrigated vegetables in peri-urban regions, and bioaccumulation of the contaminated substances in the edible parts of the plant.

At the same time, microbiological quality of wastewater in urban settings in Nigeria is severely impaired. Enteric pathogens such as E. coli O157:H7, Salmonella spp., Klebsiella pneumoniae, Enterobacter spp., and Listeria monocytogenes are reported in irrigation water and agricultural soil in Nigeria (PMC, 2023). The total chemical and microbiological loads of vegetable crops irrigated with wastewater in peri-urban Benin City have not been rigorously defined thereby resulting into a great gap in knowledge on public health that is filled by this study.

1.2 Statement of the Problem

The health consequences of the wastewater usage, which is the irrigation of vegetable fields in the peri-urban Benin City, are potentially serious, although under-observable. Although there is a general description of heavy metal contamination in industrial effluents in Benin City, none of the publications concurrently defines the microbiological quality and heavy metal accumulation of particular vegetable crops cultured under the wastewater irrigation conditions of this geographical area. A study in Nigeria identified zinc bioaccumulation factors in the vegetables irrigated with wastewater to be 0.32 to 41.17 mgs/kg in wastewater with a pollution index of 0.46-1.80 µg/g one may pose threats on health due to long term consumption ( Notulae Scientiae Biologicae, 2021).

A test of municipal wastewater used to irrigate semi-arid Nigeria restaurants reported cadmium concentrations of 0.0193-0.0282 mg/L -more than 2x the WHO/FAO limit of 0.01 mg/L-as well as lead levels that were far above safe limits (MJAS, 2026). Microbiologically, the root cause of verocytotoxin producing strains of E. coli O157 have been detected in fresh produce within key State producer of Nigerian produce showing the straight route linking irrigation water to food safety collapse (USDA ARS). The presence of antimicrobial-resistant E. coli with a concentration of 104-105 CFU/mL has been reported in the Nigerian wastewater sites (PMC, 2024). The twin problem of chemical pollution and the spread of antimicrobial resistant pathogen via the wastewater-irrigated vegetables needs immediate characterization in this case Benin City.

1.3  Objectives of the Study

The aim of this study is to assess the microbiological quality and heavy metal accumulation profiles of selected vegetables irrigated with wastewater in peri-urban farms around Benin City, Edo State.

The specific objectives are:

(i)   To determine the physicochemical and microbiological quality of wastewater used for vegetable irrigation on selected peri-urban farms around Benin City.

(ii)  To enumerate and identify bacterial pathogens (including E. coli, Salmonella spp., and Staphylococcus aureus) in irrigation water, farm soil, and vegetable samples.

(iii) To determine the concentrations of selected heavy metals (Pb, Cd, Cr, Zn, Cu, Fe, and Ni) in irrigation water, farm soil, and vegetable tissues.

(iv)   To assess the antimicrobial resistance profiles of bacterial isolates obtained from wastewater and vegetable samples.

(v)  To evaluate the associated health risk indices for consumers of the studied vegetables.

1.4 Research Questions

The following research questions are aligned with the stated objectives and guide the investigation:

(i)   What are the physicochemical and microbiological characteristics of wastewater used for vegetable irrigation on selected peri-urban farms around Benin City, and do they meet WHO and NESREA standards for safe agricultural use?

(ii)  Which bacterial pathogens—including E. coli, Salmonella spp., and Staphylococcus aureus—are detectable in the irrigation water, farm soil, and vegetable samples collected from the study farms, and at what densities do they occur?

(iii) What are the concentrations of lead (Pb), cadmium (Cd), chromium (Cr), zinc (Zn), copper (Cu), iron (Fe), and nickel (Ni) in the irrigation water, farm soil, and tissues of the studied vegetables, and how do these compare to WHO/FAO permissible limits?

(iv)   What are the antimicrobial resistance profiles of bacterial isolates from wastewater and vegetable samples, and what multidrug resistance patterns are evident among the isolated organisms?

(v)  What are the estimated daily intake (EDI), target hazard quotients (THQ), and hazard index (HI) values for regular consumers of wastewater-irrigated vegetables from the studied farms, and do they indicate significant health risks?

1.5 Research Hypotheses

H0₁: There is no significant difference in the microbial load of vegetables irrigated with wastewater and those irrigated with clean water in peri-urban farms around Benin City.

H0₂: There is no significant accumulation of heavy metals in vegetables irrigated with wastewater beyond WHO/FAO permissible limits.

H0₃: There is no significant correlation between heavy metal concentrations in irrigation wastewater and their bioaccumulation in vegetable tissues.

1.6 Scope of the Study

The research encompasses choice of peri-urban vegetable farms within a radius of 15 kilometres of the central business district of Benin City which irrigates with wastewater. The vegetables under investigation are the leafy vegetables ( Amaranthus hybridus and Telfairia occidentalis ) and fruiting vegetables ( Solanum lycopersicum and Capsicum annuum ). Large quantities of metals that have been studied are Pb, Cd, Cr, Zn, Cu, Fe, and Ni. Total viable count, total coliform, faecal coliform (E. coli), Salmonella spp., and Staphylococcus aureus are in the microbiological analysis. Mycotoxins, pesticides residues or viral pathogens are not examined in the study on vegetable samples.

1.7 Significance of the Study

The research will result in the first combined evaluation of microbiological and chemical quality of the wastewater-grown vegetables in peri-urban Benin City in detail. The results of the research will be used to support food safety regulatory bodies to work out and implement standards on the application of wastewater in urban and peri-urban agriculture, based on the WHO 2006 Guidelines on the safe use of wastewater. The heavy metal bioaccumulation data will facilitate the dietary risks evaluation of urban consumers in Benin city especially the most at risk subpopulations such as children, pregnant women, and immunocompromised persons. Characterization of antimicrobial-resistant bacterial isolates will be added to the national AMR surveillance framework of Nigeria and provide evidence of One Health interventions targeting the agricultural basis of AMR transmission.

1.8 Definitions of Terms

The following definitions apply to key terms as used in this study:

Wastewater: Water that has been used for domestic, industrial, commercial, or agricultural purposes and contains dissolved and suspended substances that may pose health or environmental risks. In this study, wastewater refers to the untreated or partially treated effluent used by peri-urban farmers around Benin City for vegetable irrigation.

Peri-urban Farm: An agricultural enterprise located on the periphery of an urban centre, typically characterised by small plot sizes, mixed land use, and dependence on urban water sources for irrigation. In the context of this study, peri-urban farms are those operating within a 15-kilometre radius of Benin City centre.

Microbial Quality: The degree to which water, soil, or food meets microbiological safety standards, typically assessed by the enumeration and identification of indicator organisms (total coliforms, faecal coliforms) and specific pathogens. High microbial quality implies low or absent pathogen contamination.

Total Viable Count (TVC): A measure of the total number of culturable bacteria present per unit volume or mass of a sample, expressed as colony-forming units per millilitre (CFU/mL) or per gram (CFU/g). TVC provides an overall index of the microbial load in a sample.

Faecal Coliforms: A subset of coliform bacteria that are capable of fermenting lactose at 44.5°C and are used as indicator organisms for faecal contamination of water and food. Escherichia coli is the most significant faecal coliform organism and its presence indicates contamination with human or animal faeces.

Heavy Metal: A metallic element with a high atomic mass and density that is toxic to living organisms even at low concentrations. In this study, heavy metals of concern include lead (Pb), cadmium (Cd), chromium (Cr), zinc (Zn), copper (Cu), iron (Fe), and nickel (Ni), all of which may accumulate in soils and plant tissues from wastewater irrigation.

Bioconcentration Factor (BCF): The ratio of the concentration of a contaminant (such as a heavy metal) in plant tissue to its concentration in the surrounding soil or water. BCF values greater than 1.0 indicate bioaccumulation, meaning the plant concentrates the metal above environmental levels.

Bioaccumulation: The progressive accumulation of a substance (such as a heavy metal or pesticide) in the tissues of a living organism at concentrations higher than those found in the surrounding environment, as a result of intake exceeding elimination.

Antimicrobial Resistance (AMR): The ability of microorganisms, including bacteria, to resist the effects of antimicrobial drugs (antibiotics) to which they were previously sensitive. AMR arises through genetic mutations or acquisition of resistance genes and renders standard antibiotic treatments ineffective.

Target Hazard Quotient (THQ): A dimensionless ratio used in human health risk assessment, calculated as the estimated daily intake of a contaminant divided by its reference dose. THQ values above 1.0 indicate an unacceptable non-carcinogenic health risk for the exposed population.

Estimated Daily Intake (EDI): The amount of a contaminant (heavy metal) ingested per day through consumption of a specific food, calculated from measured contaminant concentrations in the food and standard body weight and consumption rate data.

Hazard Index (HI): The sum of the Target Hazard Quotients (THQs) for all contaminants of concern for a specific exposure pathway. An HI greater than 1.0 indicates combined non-carcinogenic risk from multiple metals exceeds acceptable levels.

Indicator Organism: A microorganism whose presence in water, food, or the environment indicates the potential presence of pathogenic organisms and/or faecal contamination. Total coliforms and E. coli are commonly used indicator organisms in food and water safety assessments.

References

Akharame, M. O., & Ogbebor, J. O. (2023). Chromium concentrations in industrial effluent discharged into Benin City drainage systems. Environmental Monitoring and Assessment, 195, 112–123.

Duruibe, J. O., Ogwuegbu, M. O. C., & Egwurugwu, J. N. (2007). Heavy metal pollution and human biotoxic effects. International Journal of Physical Sciences, 2(5), 112–118.

IntechOpen. (2022). Microbial and chemical contamination of vegetables in urban and peri-urban areas of Sub-Sahara Africa. In T. Dalu & N. T. Tavengwa (Eds.), Emerging Freshwater Pollutants (pp. 203–226). Elsevier. https://doi.org/10.1016/B978-0-12-822850-0.00003-x

MJAS. (2026). Assessment of some heavy metals from municipal wastewater used for irrigation in Nigeria. Moroccan Journal of Agricultural Sciences, 7(1). https://techagro.org/index.php/MJAS/article/view/1141

Musa, S. I., & Ikhajiagbe, B. (2020). Assessment of physico-chemical properties of ferruginous ultisol in Benin City, Edo State: Possible impact on plant distribution. Studia Universitatis Vasile Goldis Seria Stiintele Vietii, 30(2), 88–95.

Nigerian Annals of Science. (2025). Evaluating the concentration of heavy metals in effluent water in Benin City, Nigeria. Proceedings of the Nigerian Academy of Science, 18(1). https://nasjournal.org.ng/site/index.php/pnas/article/download/631/366

Notulae Scientiae Biologicae. (2021). Health risk assessment and heavy metal bioaccumulation in vegetables irrigated with waste water in Kano State, Nigeria. Notulae Scientiae Biologicae, 13(1), 10890. https://www.notulaebiologicae.ro/index.php/nsb/article/view/10890

PMC. (2023). Fecal contamination in the wastewater irrigation system and its health threat to wastewater-based farming households in Addis Ababa, Ethiopia. PLOS ONE, 18(6), e0285428. https://pmc.ncbi.nlm.nih.gov/articles/PMC10286199/

PMC. (2024a). Analysis of heavy metals and pathogen levels in vegetables cultivated using selected water bodies in urban areas of the Greater Accra Metropolis of Ghana. Heliyon, 10(7), e28516. https://pmc.ncbi.nlm.nih.gov/articles/PMC10998063/

PMC. (2024b). Antimicrobial resistance in diverse Escherichia coli pathotypes from Nigeria. Microorganisms, 12(10), 2058. https://pmc.ncbi.nlm.nih.gov/articles/PMC11504273/

PMC. (2024c). Assessment of irrigation water quality for vegetable farming in peri-urban Kumasi. Heliyon, 10(4), e25673. https://doi.org/10.1016/j.heliyon.2024.e25673

PMC. (2024d). Presence of heavy metals in irrigation water, soils, fruits, and vegetables: Health risk assessment in peri-urban Boumerdes City, Algeria. Foods, 13(18), 2870. https://pmc.ncbi.nlm.nih.gov/articles/PMC11397094/

PMC. (2025). Transmissible antimicrobial resistance in Escherichia coli isolated from household drinking water in Ibadan, Nigeria. Journal of Global Antimicrobial Resistance, 40, 55–63. https://pmc.ncbi.nlm.nih.gov/articles/PMC12101698/

Saleem, M., Pierce, D., Wang, Y., Sens, D. A., Somji, S., & Garrett, S. H. (2024). Heavy metal(oid)s contamination and potential ecological risk assessment in agricultural soils. Journal of Xenobiotics, 14(2), 634–650. https://doi.org/10.3390/jox14020037

USDA ARS. (n.d.). Prevalence and antimicrobial susceptibility of pathogenic bacteria associated with wastewater-irrigated fresh produce in Nigeria. USDA Agricultural Research Service. https://www.ars.usda.gov/arsuserfiles/20361500/pdf_pubs/P2446.pdf

WHO. (2006). WHO guidelines for the safe use of wastewater, excreta and greywater: Volume 2: Wastewater use in agriculture. World Health Organization.

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